Inferensys

Integration

AI Integration for Sectra Neurology Imaging

A technical blueprint for embedding AI into Sectra's neurology imaging workflows, focusing on automated triage of critical findings and quantitative analysis for stroke, MS, and dementia studies.
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ARCHITECTURE FOR MRI AND CT BRAIN STUDIES

Where AI Fits into the Sectra Neurology Workflow

A technical blueprint for connecting AI to Sectra's neurology module to automate critical finding detection and quantitative analysis.

AI integration for Sectra Neurology focuses on two primary workflow surfaces: the reading worklist and the reporting interface. Within the worklist, AI models can be triggered via DICOM or HL7 messages upon study completion to analyze incoming MRI and CT brain studies. The goal is to prioritize the radiologist's list by flagging studies with potential critical findings—such as intracranial hemorrhage (ICH), mass effect, midline shift, or large vessel occlusion—and moving them to the top. This is achieved by connecting an AI inference service to Sectra's Enterprise Imaging Workflow Orchestrator, which can re-prioritize studies based on AI-generated urgency scores before they hit the neuroradiologist's queue.

During the active reading session, AI results are delivered as DICOM Structured Reports (SR) or via a custom sidebar panel within the Sectra viewer. For quantitative follow-up analysis—common in multiple sclerosis (MS) or dementia workups—AI tools for lesion segmentation and brain volumetry can be embedded. These tools generate precise measurements (e.g., lesion load, hippocampal volume) that are automatically populated into structured report templates, saving the neuroradiologist from manual contouring and calculation. The integration ensures AI outputs are non-destructive overlays, requiring explicit radiologist verification and sign-off before becoming part of the permanent record.

A production rollout typically uses a gateway architecture, where a lightweight service listens for incoming studies from Sectra PACS, routes images to the appropriate AI model (e.g., a stroke detection model for non-contrast head CTs, an MS lesion model for brain MRIs), and posts results back to a designated Sectra node. Governance is critical: all AI interactions are logged with study UIDs, model versions, and inference timestamps for audit trails. A phased implementation starts with a silent mode, where AI runs in the background to build confidence, followed by a pilot where alerts are shown to a subset of users, before full deployment with integrated reporting support.

AI WORKFLOW CONNECTIONS

Integration Surfaces in Sectra Neurology

AI-Powered Study Prioritization

The primary integration surface is the Neurology Reading Worklist within the Sectra PACS. AI models for critical findings—such as intracranial hemorrhage (ICH), mass effect, or large vessel occlusion—can be connected via DICOMweb or a dedicated API to analyze incoming MRI and CT brain studies.

Upon ingestion, studies are routed through an inference service. Results are returned as DICOM Structured Reports (SR) or via a sidecar JSON payload. The worklist can then be dynamically re-prioritized, pushing studies with high-confidence critical findings to the top. This integration uses the Sectra Workflow Orchestrator to modify worklist flags or add custom metadata, enabling 'STAT' tagging for neuroradiologists. The goal is to reduce time-to-notification for acute stroke and trauma cases from hours to minutes.

SECTRA NEUROLOGY MODULE

High-Value AI Use Cases for Neurology Imaging

Integrating AI into Sectra's neurology imaging workflow automates critical analysis, reduces time to diagnosis, and enhances quantitative follow-up for brain MRI and CT studies. These use cases connect via Sectra's APIs and DICOM interfaces to prioritize findings and support neuroradiologists.

01

Automated Intracranial Hemorrhage Triage

AI analyzes non-contrast head CTs in the background, flagging studies with potential intracranial hemorrhage (ICH), mass effect, or midline shift. Integrated with the Sectra worklist, it automatically elevates critical cases to the top for immediate radiologist review, reducing time-to-notification for stroke teams.

Minutes
Critical finding notification
02

Quantitative Brain Volumetry & Atrophy Tracking

AI performs automated segmentation of brain structures (hippocampus, ventricles, white matter) on MRI studies. Results are embedded as structured reports (DICOM SR) within the Sectra viewer, providing serial volume measurements and change-over-time graphs to support dementia and MS monitoring workflows.

Batch -> Structured
Analysis output
03

Acute Large Vessel Occlusion Detection

For stroke protocol CTAs, an AI model screens for suspected large vessel occlusions (LVOs). Positive findings trigger an automated alert within Sectra and can optionally send an HL7 message to the stroke pager system. The AI result overlay guides the radiologist to the suspected occlusion site.

Same day
Therapy decision support
04

Automated Lesion Load Quantification for MS

AI identifies and quantifies T2/FLAIR hyperintense lesions on brain MRIs for multiple sclerosis patients. The tool generates a lesion count and volume report, which is appended to the study. It enables efficient comparison to prior exams directly within the Sectra timeline viewer for progression assessment.

Hours -> Minutes
Lesion quantification
05

AI-Powered Report Drafting Support

Using AI-detected findings (e.g., hemorrhage volume, atrophy scores), a context-aware draft report is generated and populated into the Sectra reporting module. The radiologist reviews, edits, and signs off, reducing dictation time and ensuring quantitative AI results are captured in the final report.

1 sprint
Integration timeline
06

Follow-Up Recommendation & Protocoling

Based on AI analysis of current and prior studies, the system suggests appropriate follow-up intervals and recommended modalities (e.g., Follow-up MRI in 6 months for stable microhemorrhages). This logic integrates with the Sectra protocoling or decision support module to guide ordering clinicians.

Structured Guidance
Workflow output
IMPLEMENTATION PATTERNS

Example AI-Enhanced Neurology Workflows

These concrete workflows illustrate how AI can be embedded into the Sectra neurology imaging module to automate triage, accelerate quantitative analysis, and support structured reporting for MRI and CT brain studies.

Trigger: A non-contrast head CT or CTA study is completed and sent to the Sectra PACS.

Context/Data Pulled: The AI service, listening via DICOM MWL or a Sectra workflow manager webhook, retrieves the study. It accesses prior studies for the same patient (if available) from the Sectra VNA for comparison.

Model or Agent Action: A specialized stroke AI model analyzes the study for signs of:

  • Intracranial hemorrhage (ICH)
  • Large vessel occlusion (LVO) on CTA
  • Early ischemic changes (ASPECTS score)
  • Mass effect or midline shift

The model generates a DICOM Structured Report (SR) with findings, confidence scores, and, for LVO, likely occlusion location.

System Update or Next Step: The SR is sent back to Sectra PACS. A high-confidence critical finding (e.g., ICH, LVO) triggers an immediate HL7 alert to the hospital's stroke pager system or EHR. The study is automatically flagged and moved to the top of the designated "Stroke Alert" worklist in the Sectra reading station.

Human Review Point: The neuroradiologist is presented with the AI findings as an overlay or sidebar in the Sectra viewer. The original AI SR is saved as a secondary capture for audit trail. The radiologist verifies, amends if necessary, and signs the final report.

SECURE, CLINICAL-GRADE AI PIPELINE

Implementation Architecture: Data Flow & Integration Patterns

A production-ready architecture for embedding AI into the Sectra neurology workflow, connecting DICOM data to inference services and returning structured results for immediate clinical action.

The integration connects at three primary points within the Sectra Neurology PACS ecosystem: 1) The Worklist Manager API for study prioritization, 2) The DICOM Store SCP for receiving brain MRI/CT studies, and 3) The Reporting Module for injecting AI findings. A secure listener service monitors the DICOM node for new neurology studies tagged with specific modalities (e.g., MR BRAIN, CT HEAD). Upon receipt, studies are anonymized, pre-processed (e.g., NIFTI conversion, skull-stripping), and queued for inference against configured AI models—such as those for intracranial hemorrhage (ICH) detection, large vessel occlusion (LVO) scoring, or quantitative brain volumetry.

Results are returned as DICOM Structured Reports (SR) or HL7 FHIR Observation resources, containing lesion coordinates, confidence scores, and volumetric measurements. For critical findings like a high-confidence ICH, the system can trigger an HL7 ADT^A31 message to update the patient's acuity flag in the EHR and push a priority alert to the Sectra Worklist, moving the case to the top of a neuroradiologist's queue. For quantitative follow-up, AI-generated metrics (e.g., hippocampal volume, white matter hyperintensity load) are written back to the Sectra VNA as secondary captures, enabling side-by-side comparison in the Sectra 3D viewer.

Governance is enforced through a model registry and audit trail that logs every inference, including the source study UID, model version, processing latency, and user who acted on the result. Rollout follows a phased validation: starting with silent mode (AI runs in background, no alerts), progressing to concurrent read (AI results visible as a non-interruptive overlay), and finally to triage mode for after-hours and emergency department support. This architecture ensures AI augments—rather than disrupts—the established Sectra neurology reading protocol, providing a safety net for critical findings and quantitative support for complex degenerative cases.

SECTRA NEUROLOGY INTEGRATION PATTERNS

Code & Payload Examples

AI Results to Sectra Reporting

When an AI model processes a brain MRI study, the results must be sent back to Sectra as an HL7 ORU (Observation Result) message. This populates the reporting module with structured findings for radiologist review and sign-off.

Key fields include the patient and study identifiers, the AI observation code (e.g., LP31300-2 for "Intracranial Hemorrhage"), the result value (e.g., POSITIVE), and the confidence score. The OBX-5 segment carries the AI-generated text for the impression, which can pre-populate the report draft.

hl7
MSH|^~\&|AI_SERVER|INFERENCE|SECTRA_PACS|CLINIC|202403201030||ORU^R01|MSG12345|P|2.5
PID|||PATIENT123||DOE^JOHN||19700101|M
PV1||I|NEURO^MRI^^^||||||||||||||||||||||||||||||||||||||||20240320
OBR|1||STUDY456|CTBRAIN^^LN|||202403200900|||||||||NEURORAD^SMITH^J|||||||||||||||F
OBX|1|CWE|LP31300-2^Intracranial Hemorrhage^LN||ATLS_2000^Positive^SCT|%|95|||||F
OBX|2|ST|LP7482-8^Findings Impression^LN||\F\N\F\NSmall right frontal intraparenchymal hemorrhage measuring 1.2 cm. No significant mass effect.\F\N\F\N||||||F
OBX|3|NM|LP78040-0^Midline Shift mm^LN||2.1|mm|||||F

This structured payload enables Sectra to display AI findings alongside the study, trigger critical result alerts, and streamline report generation.

NEUROLOGY IMAGING WORKFLOW

Realistic Time Savings & Operational Impact

This table illustrates the operational impact of integrating AI detection and quantification tools into a Sectra neurology imaging workflow for MRI and CT brain studies. Metrics are based on typical clinical operations before and after AI-assisted review.

Workflow StepBefore AI IntegrationAfter AI IntegrationImplementation Notes

Critical Finding Triage (e.g., ICH, LVO)

Manual review of all studies in worklist order

AI pre-read flags critical cases for immediate review

AI flags routed to top of neuroradiologist's worklist; human verification required

Quantitative Brain Volumetry Analysis

Manual segmentation and measurement (45-60 mins)

AI auto-segmentation with radiologist review/edits (10-15 mins)

Outputs DICOM SR for atrophy, hippocampal volumes; integrated into Sectra reporting module

Lesion Load Calculation (e.g., MS, metastases)

Manual count and approximate measurement per series

AI automated detection, count, and volumetric sum

Results populate structured report template; radiologist confirms and contextualizes

Report Drafting for Routine Follow-ups

Dictation from scratch for stable/chronic findings

AI generates draft with prior comparison and quantified changes

Radiologist edits AI-generated narrative; uses 50-70% of draft for stable cases

Multimodal Study Correlation (MRI+CT)

Manual toggle between series and mental synthesis

AI co-registers series and highlights correlating findings

Fused visualization available in Sectra viewer; reduces cognitive load for complex cases

Critical Result Communication

Manual detection, then phone call/alert to ordering MD

AI detection triggers automated preliminary alert to clinician via HL7

AI alert is non-diagnostic; neuroradiologist makes final call and follows standard protocol

Academic/Teaching File Curation

Manual search and de-identification of interesting cases

AI auto-suggests cases meeting teaching criteria, auto-de-identifies

Cases pushed to Sectra Teaching File module with AI-generated annotations

PRODUCTION IMPLEMENTATION

Governance, Security, and Phased Rollout

A practical blueprint for deploying AI in Sectra Neurology Imaging with controlled risk and measurable impact.

A production-grade integration for Sectra Neurology Imaging is built on a zero-trust data pipeline. DICOM studies are ingested via Sectra's PACS Gateway or DICOMweb API into a secure, isolated processing environment. AI inference—for tasks like hemorrhage detection, mass effect scoring, or brain volumetry—occurs within this enclave, with results formatted as DICOM Structured Reports (SR) or HL7 FHIR Observations. These AI-generated findings are then injected back into the Sectra workflow via its Enterprise Imaging SDK or a dedicated results listener service, appearing as annotated overlays in the viewer or structured data in the reporting module. All data remains within the health system's compliance boundary, with full audit logging of every study accessed, processed, and returned.

Governance is enforced through role-based access controls (RBAC) within Sectra and the AI orchestration layer. For example, AI prioritization flags might be visible only to neuroradiologists, while quantitative atrophy reports could be auto-routed to neurologists. A human-in-the-loop approval step is configured for critical AI findings (e.g., large vessel occlusion) before final report sign-off, ensuring the radiologist retains diagnostic authority. This model creates a clear audit trail linking the original MRI/CT, the AI algorithm version, the inference result, and the radiologist's final interpretation, which is essential for regulatory compliance and clinical validation.

We recommend a phased rollout to de-risk adoption and build clinical trust. Phase 1 (Silent Mode): AI runs in the background on all neurology studies, but results are logged without affecting the worklist or viewer. This establishes a performance baseline. Phase 2 (Triage Assist): AI prioritization is enabled for the reading worklist, pushing studies with suspected critical findings (like ICH) to the top, but all findings remain non-binding. Phase 3 (Integrated Reporting): AI-generated measurements and draft findings are embedded into the Sectra reporting interface as suggestions, with one-click acceptance into the final report. Each phase includes structured feedback collection and model performance monitoring via tools like our AI Governance and LLMOps Platforms integrations to detect drift and ensure sustained clinical utility.

SECTRA NEUROLOGY IMAGING AI INTEGRATION

FAQ: Technical & Commercial Questions

Common technical and commercial questions for integrating AI into Sectra's neurology imaging module for MRI and CT brain studies.

The integration is designed to be non-disruptive, operating as a background service that enriches the existing workflow. The typical pattern is:

  1. Trigger: A new neurology study (e.g., Non-contrast Head CT, Brain MRI) arrives in the Sectra PACS and is routed to the neurology worklist.
  2. Background Processing: The study is automatically retrieved via DICOMweb or a scheduled fetch from the Sectra VNA and sent to the AI inference service.
  3. AI Analysis: Models run for specific neurology use cases (e.g., ICH detection, large vessel occlusion (LVO) flagging, brain volumetry).
  4. Result Delivery: AI findings are packaged as a DICOM Structured Report (SR) or as metadata and sent back to the Sectra PACS, linked to the original study.
  5. Contextual Presentation: When the radiologist opens the study in the Sectra IDS7 workstation, AI findings are presented as a non-obtrusive overlay, icon, or separate findings panel. The radiologist's primary reading interface remains unchanged; AI acts as a silent assistant, highlighting potential areas for review.

This ensures zero change to the radiologist's login, navigation, or dictation process, maintaining productivity while adding a safety-net layer.

Prasad Kumkar

About the author

Prasad Kumkar

CEO & MD, Inference Systems

Prasad Kumkar is the CEO & MD of Inference Systems and writes about AI systems architecture, LLM infrastructure, model serving, evaluation, and production deployment. Over 5+ years, he has worked across computer vision models, L5 autonomous vehicle systems, and LLM research, with a focus on taking complex AI ideas into real-world engineering systems.

His work and writing cover AI systems, large language models, AI agents, multimodal systems, autonomous systems, inference optimization, RAG, evaluation, and production AI engineering.